Scientific Publications
Prasad V., Cerikan B., Stahl Y., Kopp K., Magg V., Funaya C., Haselmann U., Cortese M., Heigwer F., Bageritz J., Bitto D., Jargalsaikhan S., Neufeldt C., Pahmeier F., Boutros M., Yamauchi Y., Ruggieri A., Bartenschlager R. Enhanced SARS-CoV-2 entry via UPR-dependent AMPK-related kinase NUAK2. Mol Cell. 2023 Jul 20;83(14):2559-2577.e8. doi: 10.1016/j.molcel.2023.06.020. Epub 2023 Jul 7. Pubmed.
Heigwer F., Scheeder C., Bageritz J., Yousefian S., Rauscher B., Laufer C., Beneyto S., Funk M., Peters V.,
Boulougouri M., Bilanovic J., Miersch T., Schmitt B., Blass C., Port F., and Boutros M. A global genetic interaction network by single-cell imaging and machine learning. Cell Syst. 2023 May 17;14(5):346-362.e6. doi: 10.1016/j.cels.2023.03.003. Epub 2023 Apr 27. Pubmed.
Bageritz J.*+, Krauße N.*, Yousefian S., Leible S., Valentini E., Boutros M+. Glyoxal as alternative fixative for single cell RNA sequencing. *Contributed equally, +Corresponding authors. G3 (Bethesda). 2023 Jul 26:jkad160. doi: 10.1093/g3journal/jkad160. Epub ahead of print. Pubmed.
Ernst K.*, Okonechnikov K.*, Bageritz J., Mallm JP., Maaß K., Pfister SM., Zuckermann M., Jones DTW. Establishment of a simplified preparation method for single-nucleus RNA-sequencing and its application to long-term frozen tumor tissues. *Contributed equally. bioRxiv 2020 Okt; doi: https://doi.org/10.1101/2020.10.23.351809. bioRxiv.
Bageritz J., Willnow P., Leible S., Valentini E., Boutros M., Teleman A. A gene expression atlas of the Drosophila wing imaginal disc at single-cell resolution. Nature Methods 2019 Jul;16:750–756. PubMed.
Campos B., Weisang S., Osswald F., Ali R., Sedlmeier G., Bageritz J., Mallm JP., Hartmann C., Deimling A., Popanda O., Goidts V., Plass C., Unterberg A., Schmezer P., Burthenne J., Herold Mende C. Retinoid resistance and multifaceted impairment of retinoic acid synthesis in glioblastoma. Glia 2015 Okt;63(10):1850-9. PubMed.
Campos B., Gal Z., Baader A., Schneider T., Sliwinski C, Gassel K., Bageritz J., Grabe N., Deimling A., Beckhove P., Mogler C., Goidts V., Unterberg A., Eckstein V., Herold Mende C. Aberrant self-renewal and quiescence contribute to the aggressiveness of glioblastoma. J Pathol. 2014 Sep;234(1):23-33. PubMed.
Bageritz J., Puccio L., Piro R.M., Hovestadt V., Pankert T., Lohr J., Herold-Mende C., Lichter P., Goidts V. Stem cell characteristics in glioblastoma are maintained by the ecto-nucleotidase E-NPP1. Cell Death Differ. 2014 Jun;21(6):929-40. PubMed.
Comment as author’s view: Bageritz J. and Goidts V. Functional characterization of ENPP1 reveals a link between cell cycle progression and stem-like phenotype in glioblastoma. Molecular & Cellular Oncology 2014; 1(3). PubMed.
Nakata S., Campos B., Bageritz J., Lorenzo Bermejo J., Becker N., Engel F., Acker T., Momma S., Herold-Mende C., Lichter P., Radlwimmer B., Goidts V. LGR5 is a marker of poor prognosis in glioblastoma and is required for survival of brain cancer stem-like cells. Brain Pathol. 2012; 23(1):60-72. PubMed.
Goidts V., Bageritz J., Puccio L., Nakata S., Zapatka M., Barbus S., Toedt G., Campos B., Momma S., Herold-Mende C., Lichter P., Radlwimmer B. RNAi screening in glioma stem-like cells identifies PFKFB4 as a key molecule important for cancer cell survival. Oncogene. 2012; 31: 3235-43. PubMed.
Dittmann L.M., Danner A., Gronych J., Wolter M., Stühler K., Grzendowski M., Becker N., Bageritz J., Goidts V., Toedt G., Felsberg J., Sabel M.C., Barbus S., Reifenberger G., Lichter P., Tews B. Downregulation of PRDX1 by promoter hypermethylation is frequent in 1p/19q-deleted oligodendroglial tumours and increases radio- and chemosensitivity of Hs683 glioma cells in vitro. Oncogene. 2012; 31: 3409-18. PubMed.
Gronych J., Korshunov A., Bageritz J., Milde T., Jugold M., Hambardzumyan D., Remke M., Hartmann C., Witt H., Jones D.T., Witt O., Heiland S., Bendszus M., Holland E.C., Pfister S., Lichter P. An activated mutant BRAF kinase domain is sufficient to induce pilocytic astrocytoma in mice. J Clin Invest. 2011; 121(4):1344-8. PubMed.
Book Chapter
Yousefian S., Musillo M J., Bageritz J. # (2022) Analysis of droplet-based single-cell transcriptome data in Drosophila. In: Dahmann C. (eds) Drosophila. Methods in Molecular Biology, vol 2540. Springer Nature published by Humana, New York, NY. # Corresponding author
Bageritz J., Raddi G. (2019) Single-Cell RNA Sequencing with Drop-Seq. In: Proserpio V. (eds) Single Cell Methods. Methods in Molecular Biology, vol 1979. Springer Nature published by Humana, New York, NY. PubMed.